Troubleshooting

I created a project but no plasmid appears in the catalog

That can be correct. A project is design intent. Draft sequences and assemblies do not become operational plasmids automatically.

Complete the output, review, approval, and release workflow.

I changed a sequence but the catalog still shows an older version

The catalog shows the released version. A newer current draft can coexist with an older released version until you explicitly publish the newer version.

My species page shows a Molecular Studio project but no plasmid relationship

The project relationship describes planned use. An operational plasmid–strain relationship is created separately.

A plasmid relationship says verification is pending

Publication or manual association does not automatically prove that the plasmid is present in the strain.

Record verification according to your laboratory's evidence and approval process.

A primer no longer binds after a sequence edit

Primer analyses apply to exact sequence versions. Run the primer binding scan again against the new version.

An assembly simulation succeeds. Is the plasmid approved?

No. Simulation is a computational design step. Approval and release are separate controlled actions.

AI produced a strange draft sequence

AI-generated sequence material is only a draft. Replace it with an authoritative sequence when molecular identity matters.